Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4205
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
16,982 | + | GFF4203 | 0.49 | -0.3 | |
16,983 | - | GFF4203 | 0.49 | +0.1 | |
16,997 | + | GFF4203 | 0.50 | -0.2 | |
16,998 | - | GFF4203 | 0.50 | -0.3 | |
17,138 | + | GFF4203 | 0.62 | -0.0 | |
17,138 | + | GFF4203 | 0.62 | +0.3 | |
17,139 | - | GFF4203 | 0.63 | +0.3 | |
17,139 | - | GFF4203 | 0.63 | +0.5 | |
17,178 | - | GFF4203 | 0.66 | -0.3 | |
17,192 | + | GFF4203 | 0.67 | -0.6 | |
17,225 | - | GFF4203 | 0.70 | -0.3 | |
17,317 | - | GFF4203 | 0.78 | -0.3 | |
17,569 | + | +0.1 | |||
17,570 | - | +0.4 | |||
17,582 | + | -0.0 | |||
17,586 | - | +0.1 | |||
17,604 | + | +0.2 | |||
17,604 | + | +0.4 | |||
17,604 | + | -0.3 | |||
17,688 | - | -0.1 | |||
17,701 | + | -0.3 | |||
17,944 | - | GFF4205 | 0.62 | -1.2 | |
17,944 | - | GFF4205 | 0.62 | +1.2 | |
18,270 | - | -0.4 | |||
18,492 | + | GFF4206 | 0.26 | +0.1 | |
18,654 | - | GFF4206 | 0.42 | -0.1 |
Or see this region's nucleotide sequence