Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF400

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
115,383	-				-0.2
115,431	+				+0.7
115,488	+				-0.3
115,489	-				+0.3
115,489	-				+0.7
115,536	-				-0.3
115,536	-				+0.7
115,536	-				+0.2
115,553	-				+0.3
115,629	+				+0.6
115,633	-				-0.1
115,633	-				-2.1
115,711	+				-0.3
115,713	+				-0.7
115,713	+				-0.0
115,714	-				-0.2
115,714	-				+0.2
115,714	-				-0.4
115,773	+				+0.5
115,838	+		GFF399	0.18	-0.6
115,881	+		GFF399	0.28	+0.0
116,488	-		GFF400	0.83	-1.9
116,536	+				+0.3
116,537	-				-0.7
116,544	+				-0.2
116,545	-				-1.8
116,548	+				+0.2
116,570	+				-0.1
116,619	+				-3.2
116,619	+				-1.7
116,619	+				-0.9
116,620	-				-0.4
116,623	+		GFF401	0.10	-0.9
116,623	+		GFF401	0.10	-0.5
116,624	-		GFF401	0.10	+0.2
116,624	-		GFF401	0.10	-1.4
116,740	+		GFF401	0.35	-1.3
116,992	+		GFF401	0.89	+0.4