Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF390
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
103,882 | + | GFF389 | 0.25 | -1.8 | |
104,016 | - | GFF389 | 0.36 | -5.0 | |
104,144 | - | GFF389 | 0.47 | -4.2 | |
104,197 | - | GFF389 | 0.51 | -2.5 | |
104,947 | - | GFF390 | 0.12 | -1.4 | |
104,949 | - | GFF390 | 0.13 | -0.4 | |
104,956 | + | GFF390 | 0.13 | -2.1 | |
105,243 | + | GFF390 | 0.44 | -0.5 | |
105,322 | - | GFF390 | 0.52 | -1.2 | |
105,740 | + | +0.6 | |||
105,927 | + | GFF391 | 0.14 | -2.7 | |
105,957 | + | GFF391 | 0.17 | -3.1 | |
106,223 | + | GFF391 | 0.42 | -0.8 | |
106,686 | + | GFF391 | 0.86 | -0.4 |
Or see this region's nucleotide sequence