Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3840

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
108,988	-		GFF3839	0.15	+0.2
109,004	-		GFF3839	0.16	+0.1
109,008	+		GFF3839	0.16	-0.0
109,033	+		GFF3839	0.19	-0.1
109,152	+		GFF3839	0.30	-0.2
109,167	+		GFF3839	0.32	-0.5
109,171	+		GFF3839	0.32	+0.0
109,172	-		GFF3839	0.32	+0.4
109,172	-		GFF3839	0.32	-0.2
109,202	-		GFF3839	0.35	-0.2
109,267	+		GFF3839	0.41	-0.1
109,308	+		GFF3839	0.45	-0.9
109,435	+		GFF3839	0.57	+0.4
109,564	-		GFF3839	0.69	+0.1
109,654	+		GFF3839	0.78	+0.2
109,672	+		GFF3839	0.79	-0.5
109,674	+		GFF3839	0.80	-0.3
109,807	-				+0.1
109,942	-				+0.2
109,946	+				-2.4
110,210	+		GFF3840	0.30	-0.7
110,211	-		GFF3840	0.30	-0.2
110,345	-		GFF3840	0.45	-1.4
110,446	+		GFF3840	0.56	-0.2
110,760	-				+0.4
110,833	+				-0.2
110,854	+				-0.5
110,855	-				+0.6
111,135	-				+0.6
111,153	-				-0.0
111,283	-				+1.4
111,285	-				-0.5
111,287	-				+0.1
111,353	-				-0.6
111,692	+		GFF3843	0.87	-0.2