Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3838

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
106,421	-		GFF3837	0.11	+0.2
106,681	-		GFF3837	0.37	+0.2
106,822	-		GFF3837	0.51	-0.1
107,052	+		GFF3837	0.74	-1.5
107,053	-		GFF3837	0.74	+0.0
107,053	-		GFF3837	0.74	+0.8
107,316	+				-0.6
107,586	-		GFF3838	0.21	+0.0
107,684	-		GFF3838	0.28	+0.2
107,899	+		GFF3838	0.45	-0.6
107,900	-		GFF3838	0.45	-0.4
108,000	-		GFF3838	0.52	-0.2
108,114	-		GFF3838	0.61	+0.1
108,121	+		GFF3838	0.62	-0.1
108,121	+		GFF3838	0.62	-0.5
108,121	+		GFF3838	0.62	-0.9
108,122	-		GFF3838	0.62	-0.0
108,122	-		GFF3838	0.62	-0.2
108,267	-		GFF3838	0.73	+0.5
108,268	+		GFF3838	0.73	+0.8
108,454	+		GFF3838	0.87	-0.2
108,604	-				+0.1
108,830	+				-0.0
108,834	+				+0.0
108,835	-				+0.4
108,882	-				+0.2
108,895	-				+0.2
108,938	-				+0.1
108,988	-		GFF3839	0.15	+0.2
109,004	-		GFF3839	0.16	+0.1
109,008	+		GFF3839	0.16	-0.0
109,033	+		GFF3839	0.19	-0.1
109,152	+		GFF3839	0.30	-0.2
109,167	+		GFF3839	0.32	-0.5
109,171	+		GFF3839	0.32	+0.0
109,172	-		GFF3839	0.32	+0.4
109,172	-		GFF3839	0.32	-0.2
109,202	-		GFF3839	0.35	-0.2
109,267	+		GFF3839	0.41	-0.1
109,308	+		GFF3839	0.45	-0.9
109,435	+		GFF3839	0.57	+0.4
109,564	-		GFF3839	0.69	+0.1