Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3733
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
337 | + | GFF3733 | 0.25 | -0.7 | |
803 | + | GFF3733 | 0.84 | -3.2 | |
804 | - | GFF3733 | 0.84 | -0.6 | |
838 | + | GFF3733 | 0.88 | -1.1 | |
1,106 | - | +0.3 | |||
1,167 | + | -0.1 | |||
1,574 | - | -0.7 | |||
1,574 | - | +0.2 | |||
1,574 | - | -0.0 | |||
1,919 | + | GFF3735 | 0.13 | +0.3 | |
1,919 | + | GFF3735 | 0.13 | -0.1 |
Or see this region's nucleotide sequence