Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3697

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
50,288	+		GFF3696	0.34	+0.2
50,288	+		GFF3696	0.34	+1.1
50,290	+		GFF3696	0.34	+0.2
50,290	+		GFF3696	0.34	+0.0
50,291	-		GFF3696	0.35	+0.8
50,304	+		GFF3696	0.35	+0.1
50,389	-		GFF3696	0.42	+0.6
50,436	-		GFF3696	0.45	-0.5
50,436	-		GFF3696	0.45	+1.0
50,627	+		GFF3696	0.60	+0.2
50,627	+		GFF3696	0.60	-1.0
50,628	-		GFF3696	0.60	+0.4
50,628	-		GFF3696	0.60	+1.0
50,720	+		GFF3696	0.67	+0.4
50,720	+		GFF3696	0.67	+0.5
50,721	-		GFF3696	0.67	+0.5
50,805	+		GFF3696	0.73	-0.1
50,806	-		GFF3696	0.73	+0.2
50,940	+		GFF3696	0.83	+0.9
51,046	-				+0.2
51,046	-				+0.3
51,052	-				-0.2
51,053	+				+0.0
51,054	-				-0.5
51,235	+		GFF3697	0.28	+0.2
51,235	+		GFF3697	0.28	+0.3
51,238	-		GFF3697	0.29	+0.3
51,238	-		GFF3697	0.29	+0.2
51,238	-		GFF3697	0.29	+0.2
51,287	-		GFF3697	0.49	+0.3