Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF366

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
84,703	-				-0.6
84,764	-				+0.4
84,845	-		GFF365	0.17	-0.1
84,845	-		GFF365	0.17	-0.2
84,873	-		GFF365	0.21	-2.1
85,454	+		GFF365	0.88	-0.1
85,454	+		GFF365	0.88	+0.4
85,594	-				-0.4
85,595	+				-0.2
85,596	-				-0.3
85,596	-				-0.1
85,596	-				-0.4
85,600	-				+0.7
85,600	-				-1.2
85,600	-				+0.6
85,625	-				-0.8
85,625	-				-1.4
85,642	-				-1.0
85,642	-				+0.1
85,740	+				-0.6
85,788	-		GFF366	0.15	-0.3
85,788	-		GFF366	0.15	-0.3
86,035	+		GFF366	0.49	-0.6
86,036	-		GFF366	0.49	-1.3
86,282	-		GFF366	0.84	-1.6
86,488	-				-0.6
86,546	+		GFF367	0.11	-1.6
86,598	-		GFF367	0.19	-0.9
86,825	-		GFF367	0.54	-0.5
86,868	-		GFF367	0.61	-1.1
86,894	+		GFF367	0.65	-0.0
86,997	+		GFF367	0.81	+0.0
87,005	+		GFF367	0.82	-0.0
87,006	-		GFF367	0.82	+0.5
87,006	-		GFF367	0.82	+1.0
87,006	-		GFF367	0.82	+0.1
87,006	-		GFF367	0.82	+1.2
87,006	-		GFF367	0.82	-3.1
87,151	-				+0.1
87,151	-				-0.4
87,290	-		GFF368	0.16	+0.8
87,343	-		GFF368	0.24	+0.5
87,375	-		GFF368	0.30	-0.8