Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3653

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
66	+				-0.3
67	-				-0.2
136	-		GFF3653	0.13	+0.3
136	-		GFF3653	0.13	+0.2
136	-		GFF3653	0.13	+0.6
214	-		GFF3653	0.23	-0.1
403	+		GFF3653	0.45	+0.8
403	+		GFF3653	0.45	+0.3
403	+		GFF3653	0.45	+0.4
434	-		GFF3653	0.49	-0.4
684	+		GFF3653	0.79	+1.6
685	-		GFF3653	0.79	+0.8
732	-		GFF3653	0.85	-0.5
817	+				+0.9
817	+				-0.4
818	-				+0.3
931	-				+0.6
931	-				+0.2
931	-				+0.2
932	+				+0.0
955	-				-0.2
1,075	+				+0.6
1,356	-		GFF3654	0.13	+1.8
1,399	-		GFF3654	0.17	-0.4
1,610	+		GFF3654	0.35	+0.6
1,611	-		GFF3654	0.35	+1.0
1,626	-		GFF3654	0.36	-0.1
1,626	-		GFF3654	0.36	+0.6
1,627	+		GFF3654	0.36	-0.4
1,627	+		GFF3654	0.36	+0.2
1,628	-		GFF3654	0.37	+0.5
1,732	-		GFF3654	0.46	-0.9