Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3566

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
320,499	+		GFF3564	0.46	+0.0
320,500	-		GFF3564	0.46	+0.1
320,783	+		GFF3564	0.74	+0.1
320,784	-		GFF3564	0.74	+0.4
320,787	+		GFF3564	0.74	-0.1
320,787	+		GFF3564	0.74	+0.5
320,794	-		GFF3564	0.75	-0.1
321,431	-				-1.5
321,443	-				-2.0
321,594	-		GFF3566	0.68	-1.8
321,624	-		GFF3566	0.81	-1.9
321,624	-		GFF3566	0.81	-0.5
321,670	-				-1.7
321,710	-				-1.2
321,716	-				-2.8
321,719	-				-1.8
321,767	-				-0.1
321,857	+				+0.0
322,166	-		GFF3567	0.13	-0.5
322,227	+		GFF3567	0.18	-0.3
322,342	-		GFF3567	0.26	+0.0
322,542	+		GFF3567	0.40	-0.5
322,543	-		GFF3567	0.40	+0.1
322,543	-		GFF3567	0.40	+0.4