Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3342

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
109,575	+				+0.1
109,605	+				-0.3
109,644	+				+1.0
109,791	-		GFF3340	0.34	+0.2
109,888	-		GFF3340	0.72	+0.1
109,888	-		GFF3340	0.72	+0.6
109,888	-		GFF3340	0.72	-0.1
109,979	-				-0.2
110,037	-				+0.0
110,226	+				-0.8
110,406	-		GFF3341	0.65	-0.1
110,475	-				-0.0
110,487	-				+0.7
110,542	+				-0.1
110,926	-		GFF3342	0.34	-0.6
110,926	-		GFF3342	0.34	-2.6
110,951	+		GFF3342	0.37	-0.6
110,982	+		GFF3342	0.40	+2.0
110,982	+		GFF3342	0.40	-0.9
110,982	+		GFF3342	0.40	-0.3
110,983	-		GFF3342	0.40	-1.0
111,016	-		GFF3342	0.43	-0.4
111,049	+		GFF3342	0.46	-0.3
111,049	+		GFF3342	0.46	-1.0
111,050	-		GFF3342	0.46	-0.7
111,054	-		GFF3342	0.47	-2.0
111,163	+		GFF3342	0.57	-1.0
111,164	-		GFF3342	0.57	-0.1
111,166	-		GFF3342	0.57	-1.0
111,209	-		GFF3342	0.61	-0.8
111,306	+		GFF3342	0.71	+0.6
111,517	-				-1.7
111,518	+				+0.4
111,519	-				-0.8
111,797	+		GFF3343	0.14	-0.5
111,841	+		GFF3343	0.22	+0.1
111,861	+		GFF3343	0.26	+0.0
111,862	-		GFF3343	0.26	-0.8
111,943	+		GFF3343	0.40	+0.4
112,065	-		GFF3343	0.62	+0.0
112,068	-		GFF3343	0.63	-0.1
112,108	-		GFF3343	0.70	+0.2
112,204	+		GFF3343	0.87	+0.1
112,204	+		GFF3343	0.87	+0.7
112,231	-				+0.2
112,231	-				-0.1
112,288	-				-0.1
112,306	+				-0.1
112,461	-				-0.2