Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3306

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
77,337	-		GFF3305	0.22	-0.0
77,468	+		GFF3305	0.37	+0.6
77,484	-		GFF3305	0.39	-0.0
77,650	-		GFF3305	0.58	+0.3
77,669	+		GFF3305	0.60	-0.7
77,669	+		GFF3305	0.60	+1.1
77,815	+		GFF3305	0.76	-0.0
77,885	+		GFF3305	0.84	+0.2
77,886	-		GFF3305	0.84	+0.3
78,023	+				-0.1
78,120	+				-0.7
78,121	-				+0.5
78,121	-				+0.8
78,124	+				+0.0
78,160	+				-0.1
78,206	+				-0.3
78,235	-				+0.3
78,645	-		GFF3306	0.23	+0.3
78,674	-		GFF3306	0.24	+0.1
78,674	-		GFF3306	0.24	+0.3
78,984	-		GFF3306	0.45	+0.5
79,300	-		GFF3306	0.66	+0.3
79,347	-		GFF3306	0.69	-0.4
79,633	+		GFF3306	0.89	+0.9
79,941	+				+0.0
79,957	+				+1.1
79,986	+				-0.2
79,987	-				-0.5
80,176	+				-1.1
80,402	+		GFF3307	0.44	+0.1
80,403	-		GFF3307	0.44	-0.9
80,559	-		GFF3307	0.70	+0.2
80,618	-		GFF3307	0.80	+0.3