Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3305

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
76,153	-				+0.5
76,160	-				+0.5
76,222	+				+0.2
76,223	-				+0.3
76,223	-				-0.7
76,224	+				+0.0
76,228	+				+0.7
76,229	-				+0.1
76,322	+				+0.4
76,406	+		GFF3304	0.20	-0.2
76,705	-		GFF3304	0.58	+0.1
76,753	-		GFF3304	0.64	-1.3
76,754	+		GFF3304	0.64	+0.3
76,767	-		GFF3304	0.66	-0.8
77,035	-				-0.0
77,040	-				+0.4
77,224	+				+0.4
77,337	-		GFF3305	0.22	-0.0
77,468	+		GFF3305	0.37	+0.6
77,484	-		GFF3305	0.39	-0.0
77,650	-		GFF3305	0.58	+0.3
77,669	+		GFF3305	0.60	-0.7
77,669	+		GFF3305	0.60	+1.1
77,815	+		GFF3305	0.76	-0.0
77,885	+		GFF3305	0.84	+0.2
77,886	-		GFF3305	0.84	+0.3
78,023	+				-0.1
78,120	+				-0.7
78,121	-				+0.5
78,121	-				+0.8
78,124	+				+0.0
78,160	+				-0.1
78,206	+				-0.3
78,235	-				+0.3
78,645	-		GFF3306	0.23	+0.3
78,674	-		GFF3306	0.24	+0.1
78,674	-		GFF3306	0.24	+0.3
78,984	-		GFF3306	0.45	+0.5