Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3228

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
139	+		GFF3227	0.16	-0.8
139	+		GFF3227	0.16	-1.1
141	+		GFF3227	0.16	-0.9
141	+		GFF3227	0.16	-1.0
197	-		GFF3227	0.24	-1.0
385	-		GFF3227	0.48	-1.1
407	+		GFF3227	0.51	-2.0
645	+		GFF3227	0.82	-1.2
652	+		GFF3227	0.83	-0.9
756	+				-1.3
788	+				-1.1
839	+		GFF3228	0.10	-1.0
871	-		GFF3228	0.16	-2.4
872	+		GFF3228	0.16	-0.7
872	+		GFF3228	0.16	-1.8
947	+		GFF3228	0.29	-1.3
948	-		GFF3228	0.29	-0.3
1,035	+		GFF3228	0.44	-1.4
1,035	+		GFF3228	0.44	-1.8
1,112	+		GFF3228	0.57	-1.5
1,295	+		GFF3228	0.88	-1.6
1,307	-				-1.0
1,440	-				-1.0
1,451	+				-0.7
1,451	+				-1.2
1,481	+				-1.2
1,482	-				-2.0
1,809	-				-1.4
1,809	-				-0.8
2,229	-		GFF3229	0.40	-2.0