Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF317

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
32,959	+		GFF314	0.66	-0.7
33,044	+		GFF314	0.76	+0.6
33,055	+		GFF314	0.77	-0.8
33,056	-		GFF314	0.78	+0.6
33,255	+				-0.4
33,281	+				+0.3
33,524	-				-1.2
33,634	-				-0.4
33,656	+		GFF316	0.12	+1.0
33,656	+		GFF316	0.12	-0.1
33,657	-		GFF316	0.12	-0.1
33,657	-		GFF316	0.12	+0.7
33,657	-		GFF316	0.12	-0.1
33,966	+		GFF317	0.10	-0.1
33,967	-		GFF317	0.10	+0.1
34,007	+		GFF317	0.20	+0.2
34,018	+		GFF317	0.23	-0.4
34,046	+		GFF317	0.30	-0.5
34,050	+		GFF317	0.31	-0.1
34,050	+		GFF317	0.31	+0.1
34,050	+		GFF317	0.31	-1.2
34,051	-		GFF317	0.31	+0.6
34,051	-		GFF317	0.31	-0.0
34,051	-		GFF317	0.31	-0.3
34,176	+		GFF317	0.62	-0.1
34,216	+		GFF317	0.72	+0.7
34,216	+		GFF317	0.72	+0.1
34,350	+				+1.0
34,456	-				-0.3
34,456	-				-0.3
34,456	-				-0.9
34,599	-				-0.2
34,733	+		GFF318	0.20	-0.2
34,756	-		GFF318	0.21	-0.0
34,756	-		GFF318	0.21	+0.1
34,757	+		GFF318	0.22	+0.7
34,763	+		GFF318	0.22	+0.7
34,831	+		GFF318	0.28	+0.0
34,832	-		GFF318	0.28	+0.4
34,832	-		GFF318	0.28	-0.1
35,021	+		GFF318	0.44	-0.1
35,053	+		GFF318	0.46	+0.3
35,054	-		GFF318	0.46	-1.0
35,123	+		GFF318	0.52	+0.3
35,130	-		GFF318	0.53	-0.5
35,178	-		GFF318	0.57	-0.0
35,178	-		GFF318	0.57	-0.6
35,211	+		GFF318	0.60	-0.2
35,228	+		GFF318	0.61	-0.5
35,286	-		GFF318	0.66	-0.1