Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3124

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
128,470	-		GFF3122	0.32	-0.1
128,488	+		GFF3122	0.34	+0.7
128,850	-		GFF3122	0.74	+0.3
128,976	+		GFF3122	0.88	+0.9
129,012	-				+0.2
129,158	+		GFF3123	0.76	+0.3
129,158	+		GFF3123	0.76	-0.1
129,288	+				+0.3
129,288	+				+0.3
129,377	+				-0.3
129,378	-				+0.1
129,378	-				+0.5
129,433	-		GFF3124	0.14	-0.0
129,482	+		GFF3124	0.18	+0.4
129,527	-		GFF3124	0.22	-0.3
129,599	+		GFF3124	0.28	+0.8
129,807	-		GFF3124	0.46	+0.0
129,814	+		GFF3124	0.47	-0.4
129,814	+		GFF3124	0.47	-0.2
129,815	-		GFF3124	0.47	+0.2
129,815	-		GFF3124	0.47	-0.2
129,815	-		GFF3124	0.47	+0.3
129,866	-		GFF3124	0.51	-0.1
129,878	+		GFF3124	0.52	+0.8
129,879	-		GFF3124	0.52	-0.9
129,933	+		GFF3124	0.57	+0.3
129,984	-		GFF3124	0.61	+0.3
130,015	+		GFF3124	0.64	+0.1
130,072	+		GFF3124	0.69	+0.4
130,072	+		GFF3124	0.69	+0.3
130,168	+		GFF3124	0.77	-1.2
130,190	+		GFF3124	0.79	-0.1
130,190	+		GFF3124	0.79	+0.8
130,191	-		GFF3124	0.79	+1.5
130,237	+		GFF3124	0.83	+0.0
130,238	-		GFF3124	0.83	-0.0
130,292	-		GFF3124	0.88	+0.6
130,482	+				-1.3
130,482	+				+1.2
130,483	-				-0.2
130,524	+				+0.8
130,581	+				+0.3
130,582	-				+0.7
130,839	-		GFF3125	0.36	+0.1
130,839	-		GFF3125	0.36	+1.1
130,936	-		GFF3125	0.48	-0.2
130,954	+		GFF3125	0.50	+0.5
131,055	+		GFF3125	0.62	-0.6
131,128	-		GFF3125	0.71	-0.0