Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3038

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
51,651	+				+0.3
51,651	+				-0.1
51,652	-				+0.1
51,652	-				-0.3
51,652	-				+0.3
51,749	+				-0.1
51,754	-				-0.2
51,774	-				+0.0
51,781	-				+0.5
51,940	+		GFF3037	0.35	-0.1
51,955	-		GFF3037	0.48	+0.6
52,046	+				-0.5
52,047	-				+0.0
52,100	+				+0.2
52,101	-				+0.2
52,113	+				-0.0
52,114	-				+0.7
52,381	+		GFF3038	0.20	-0.3
52,382	-		GFF3038	0.20	+0.9
52,429	-		GFF3038	0.26	-1.7
52,607	-		GFF3038	0.50	-1.3
52,609	+		GFF3038	0.50	+0.1
52,609	+		GFF3038	0.50	-0.9
52,610	-		GFF3038	0.50	+0.2
52,624	+		GFF3038	0.52	-2.0
52,624	+		GFF3038	0.52	-0.1
52,670	-		GFF3038	0.58	+0.3
52,722	+		GFF3038	0.65	-0.7
52,771	-		GFF3038	0.72	-0.9
52,820	-		GFF3038	0.78	-0.3
52,944	-				+0.0
52,987	+				+0.3
52,987	+				-0.6
52,987	+				-0.2
52,991	+				-0.2
52,991	+				-1.1
52,992	-				+0.7
52,992	-				-0.4
52,992	-				+0.1
52,992	-				-0.0
52,995	+				+0.6
52,996	-				+0.0
53,026	+				-0.2
53,094	+				+0.3
53,094	+				-0.1
53,318	+		GFF3039	0.18	-0.8
53,393	-		GFF3039	0.28	-0.6
53,443	-		GFF3039	0.35	+0.4
53,579	-		GFF3039	0.54	-0.8
53,965	+				-0.0