Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3035

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
48,591	+		GFF3034	0.11	-0.3
48,662	-		GFF3034	0.18	-0.3
48,783	+		GFF3034	0.30	+0.0
48,850	-		GFF3034	0.36	+0.2
48,925	-		GFF3034	0.44	+1.2
49,172	+		GFF3034	0.68	+0.4
49,173	-		GFF3034	0.68	+0.2
49,239	+		GFF3034	0.75	-0.4
49,240	-		GFF3034	0.75	+0.1
49,254	+		GFF3034	0.76	-0.4
49,255	-		GFF3034	0.76	-0.5
49,256	+		GFF3034	0.76	+0.3
49,290	+		GFF3034	0.80	-0.7
49,418	-				-0.2
49,546	-				+0.1
49,692	-		GFF3035	0.13	+0.8
49,734	-		GFF3035	0.16	+0.3
49,875	-		GFF3035	0.25	-0.2
49,929	+		GFF3035	0.29	+1.3
49,930	-		GFF3035	0.29	-0.4
49,930	-		GFF3035	0.29	+0.4
49,930	-		GFF3035	0.29	+1.5
49,930	-		GFF3035	0.29	-0.1
49,980	+		GFF3035	0.33	+0.3
49,989	+		GFF3035	0.33	+0.4
50,026	+		GFF3035	0.36	-0.7
50,026	+		GFF3035	0.36	+0.4
50,027	-		GFF3035	0.36	-0.5
50,031	-		GFF3035	0.36	+0.7
50,091	-		GFF3035	0.40	+0.3
50,147	+		GFF3035	0.44	+0.4
50,211	+		GFF3035	0.48	+0.1
50,411	+		GFF3035	0.62	-0.2
50,424	+		GFF3035	0.63	+0.2
50,424	+		GFF3035	0.63	+0.4
50,663	+		GFF3035	0.79	+0.0
50,699	+		GFF3035	0.81	+0.2
50,700	-		GFF3035	0.81	+0.1
50,883	-				-0.1
50,887	-				-0.1
50,887	-				+0.2
51,651	+				+0.3
51,651	+				-0.1
51,652	-				+0.1
51,652	-				-0.3
51,652	-				+0.3
51,749	+				-0.1
51,754	-				-0.2
51,774	-				+0.0
51,781	-				+0.5
51,940	+		GFF3037	0.35	-0.1
51,955	-		GFF3037	0.48	+0.6