Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3015

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
29,897	+				+0.2
30,571	-				-1.2
30,609	-				-0.1
30,643	-				-1.4
30,666	+				-0.4
30,667	-				-0.1
30,682	-				-0.2
30,749	+				+0.1
30,770	+				-0.3
30,855	+		GFF3015	0.15	+0.0
30,855	+		GFF3015	0.15	+1.0
30,882	+		GFF3015	0.18	+0.0
31,320	+		GFF3015	0.67	+0.1
31,625	-				-0.1
31,793	+		GFF3016	0.65	+0.1
31,817	-		GFF3016	0.75	+1.7
31,884	+				-0.5
32,000	+		GFF3017	0.16	+0.0
32,102	-		GFF3017	0.29	+0.3
32,170	+		GFF3017	0.38	+0.1
32,255	-		GFF3017	0.50	-0.3
32,372	-		GFF3017	0.65	-1.0