Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2968

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
51,233	-		GFF2966	0.78	-0.0
51,233	-		GFF2966	0.78	+0.2
51,354	+				-0.2
51,440	-				-0.3
51,448	+				+1.2
51,449	-				-1.1
51,673	+		GFF2967	0.30	-0.2
51,891	-		GFF2967	0.73	+0.2
51,891	-		GFF2967	0.73	+0.3
52,110	-		GFF2968	0.13	-0.3
52,112	-		GFF2968	0.13	-0.8
52,189	+		GFF2968	0.25	-1.2
52,335	-		GFF2968	0.48	-0.9
52,565	+		GFF2968	0.84	-1.8
52,605	-				-0.3
52,606	+				-1.8
52,606	+				+0.0
52,607	-				-1.1
52,607	-				-1.7
52,607	-				-0.7
52,607	-				+1.2
52,682	-				-0.1
52,684	-				-1.1
52,732	-				+0.2
52,820	+				-1.0
52,820	+				+1.3
52,821	-				-0.5
52,880	+				+0.1
52,915	-				-0.1
52,931	+				-0.0
52,931	+				-0.6
52,940	-				+0.2
53,019	+		GFF2969	0.11	+0.1
53,020	-		GFF2969	0.11	-0.2
53,049	+		GFF2969	0.15	+0.8
53,160	+		GFF2969	0.29	+0.0
53,161	-		GFF2969	0.29	+0.0
53,174	+		GFF2969	0.31	-0.4
53,177	+		GFF2969	0.31	+0.2
53,177	+		GFF2969	0.31	+0.2
53,178	-		GFF2969	0.31	-0.1
53,185	-		GFF2969	0.32	-1.4
53,248	+		GFF2969	0.40	-0.0
53,276	+		GFF2969	0.44	+0.5
53,325	-		GFF2969	0.50	+0.6
53,382	+		GFF2969	0.57	-0.5
53,538	-		GFF2969	0.76	+0.1
53,549	+		GFF2969	0.78	-0.4
53,624	-		GFF2969	0.87	-0.2