Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2962

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
45,549	+		GFF2960	0.78	+0.1
45,762	-				-0.3
45,762	-				+0.7
46,049	-		GFF2961	0.28	+0.6
46,163	+		GFF2961	0.53	+0.6
46,166	+		GFF2961	0.53	+0.3
46,182	+		GFF2961	0.57	-0.2
46,239	-		GFF2961	0.69	+0.1
46,368	-				-0.3
46,384	+				+0.2
46,384	+				-0.1
46,384	+				+0.6
46,384	+				-0.1
46,385	-				-0.3
46,385	-				-0.1
46,421	-				+0.3
46,467	-				-0.4
46,762	+		GFF2962	0.43	+0.3
46,882	+		GFF2962	0.57	+0.0
46,916	+		GFF2962	0.61	-0.4
47,074	+		GFF2962	0.79	+0.9
47,224	-				+1.1
47,250	+				-0.4
47,251	-				+0.5
47,251	-				+0.1
47,382	-		GFF2963	0.19	+0.4
47,382	-		GFF2963	0.19	+0.1
47,383	+		GFF2963	0.19	+1.0
47,474	-		GFF2963	0.32	+0.2
47,671	-		GFF2963	0.61	+0.2
47,779	-		GFF2963	0.76	+0.3
47,789	+		GFF2963	0.78	-0.4
47,790	-		GFF2963	0.78	+0.6
47,912	+				-0.1
47,934	+				+0.0
47,935	-				+0.6
47,943	-				+0.3
47,943	-				+0.5
47,946	-				-0.0
47,946	-				-0.2
47,960	-				+0.0
47,960	-				-0.5
48,106	+				-0.4
48,106	+				-0.2
48,120	+				+1.3
48,132	+				+0.0
48,256	-		GFF2964	0.18	+0.2