Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2904

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
29,591	+		GFF2902	0.24	-0.4
29,730	+		GFF2902	0.39	+0.3
29,800	+		GFF2902	0.47	+0.3
29,905	+		GFF2902	0.58	+0.3
29,906	-		GFF2902	0.58	+1.4
29,948	-		GFF2902	0.63	+0.4
29,991	+		GFF2902	0.67	+0.8
30,007	+		GFF2902	0.69	+0.5
30,007	+		GFF2902	0.69	-0.2
30,007	+		GFF2902	0.69	+0.1
30,122	+		GFF2902	0.82	-0.2
30,122	+		GFF2902	0.82	+0.0
30,122	+		GFF2902	0.82	+0.5
30,122	+		GFF2902	0.82	+0.2
30,123	-		GFF2902	0.82	-0.3
30,123	-		GFF2902	0.82	-1.9
30,195	-		GFF2902	0.89	+1.4
30,271	+				+0.4
30,380	-		GFF2903	0.26	+0.5
30,383	+		GFF2903	0.27	-0.3
30,384	-		GFF2903	0.28	+0.3
30,384	-		GFF2903	0.28	+0.8
30,391	+		GFF2903	0.30	-0.5
30,392	-		GFF2903	0.31	+0.4
30,399	-		GFF2903	0.33	+0.3
30,440	+		GFF2903	0.49	+0.1
30,524	+		GFF2903	0.81	+0.2
30,525	-		GFF2903	0.81	+0.6
30,552	-				-0.8
30,718	-				+0.0
30,724	-				+0.9
30,862	+		GFF2904	0.18	-0.1
30,896	-		GFF2904	0.20	+0.2
30,945	+		GFF2904	0.23	+0.4
31,055	+		GFF2904	0.29	+0.4
31,056	-		GFF2904	0.29	-0.7
31,056	-		GFF2904	0.29	-0.1
31,062	+		GFF2904	0.30	+0.7
31,062	+		GFF2904	0.30	+0.1
31,062	+		GFF2904	0.30	-0.4
31,062	+		GFF2904	0.30	-0.2
31,063	-		GFF2904	0.30	+0.7
31,063	-		GFF2904	0.30	+0.3
31,160	+		GFF2904	0.36	+0.2
31,424	-		GFF2904	0.52	+0.2
31,424	-		GFF2904	0.52	-0.5
31,458	+		GFF2904	0.54	+0.0
31,488	-		GFF2904	0.56	+0.9
31,593	+		GFF2904	0.62	+0.9
31,614	-		GFF2904	0.63	+0.4
31,738	-		GFF2904	0.71	-0.1
32,038	-		GFF2904	0.89	-0.2
32,048	+		GFF2904	0.90	-0.1
32,114	+				+0.0
32,114	+				+0.0
32,115	-				+0.3
32,137	-				+0.9
32,161	+				-0.2
32,194	+				+0.2
32,218	-				-0.2
32,646	-				+0.6
32,646	-				+0.2
32,646	-				+0.2
32,806	+				+0.4
32,807	-				+0.1
32,866	+				+0.4
32,866	+				+0.2
32,867	-				+0.6
32,867	-				-0.1
32,867	-				+0.5
32,868	+				+0.4
32,868	+				+0.8
32,869	-				+0.1
32,869	-				-2.0
32,878	+				+0.2
32,932	-				+0.3
32,953	-				+0.2
32,953	-				+1.6
32,957	-				+0.3
32,957	-				+0.1
32,969	-		GFF2905	0.11	+0.4
33,094	+		GFF2905	0.19	-0.1
33,095	-		GFF2905	0.19	-0.3
33,116	+		GFF2905	0.20	+0.0
33,142	+		GFF2905	0.22	+0.4