Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2773
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
296,898 | - | GFF2771 | 0.41 | -0.6 | |
296,900 | + | GFF2771 | 0.41 | +0.4 | |
296,901 | - | GFF2771 | 0.41 | -0.3 | |
297,063 | + | GFF2771 | 0.61 | -0.9 | |
297,428 | - | GFF2772 | 0.12 | +0.4 | |
297,428 | - | GFF2772 | 0.12 | +0.1 | |
297,503 | + | GFF2772 | 0.32 | -0.4 | |
297,504 | - | GFF2772 | 0.33 | +0.9 | |
297,626 | + | GFF2772 | 0.65 | +0.3 | |
297,630 | + | GFF2772 | 0.66 | +0.4 | |
297,630 | + | GFF2772 | 0.66 | +0.8 | |
297,630 | + | GFF2772 | 0.66 | +0.0 | |
297,828 | - | -1.6 | |||
297,943 | + | GFF2773 | 0.21 | -0.6 | |
297,943 | + | GFF2773 | 0.21 | -0.9 | |
297,949 | + | GFF2773 | 0.22 | -2.9 | |
298,004 | + | GFF2773 | 0.28 | -3.1 | |
298,114 | + | GFF2773 | 0.42 | +0.6 | |
298,114 | + | GFF2773 | 0.42 | -2.5 | |
298,114 | + | GFF2773 | 0.42 | -1.7 | |
298,115 | - | GFF2773 | 0.42 | -2.3 | |
298,489 | - | GFF2773 | 0.87 | -1.9 | |
298,489 | - | GFF2773 | 0.87 | -2.6 | |
298,602 | - | +0.3 |
Or see this region's nucleotide sequence