Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2679

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
200,803	-		GFF2677	0.71	-0.1
200,952	-		GFF2677	0.86	-0.4
201,045	-				+0.2
201,069	+				-0.6
201,069	+				+0.0
201,070	-				-0.6
201,070	-				+0.4
201,075	-				-0.6
201,130	+				-0.2
201,179	+				-0.3
201,181	+				-0.4
201,197	+				-0.9
201,285	+		GFF2678	0.16	-0.1
201,286	-		GFF2678	0.17	-0.5
201,514	-		GFF2678	0.62	+0.4
201,532	-		GFF2678	0.65	+0.4
201,634	-		GFF2678	0.85	+0.1
201,707	-				+0.0
201,743	-				-0.8
201,901	+				-0.9
201,906	-				-0.4
201,948	-				+0.1
202,244	+		GFF2679	0.29	-0.7
202,386	-		GFF2679	0.38	+0.0
202,516	-		GFF2679	0.47	-0.4
202,644	-		GFF2679	0.55	-1.0
202,722	-		GFF2679	0.60	-0.7
202,722	-		GFF2679	0.60	-0.7
202,722	-		GFF2679	0.60	-2.6
202,957	-		GFF2679	0.75	-0.2
203,048	+		GFF2679	0.81	-0.8
203,268	-				-0.7
203,272	-				+0.5
203,281	-				+0.6
203,369	-				-0.5
203,369	-				-0.2
203,369	-				+0.5
203,420	+				-0.7
203,507	+				+0.1
203,574	-				+1.0
203,574	-				+0.6
203,605	-		GFF2680	0.11	-0.0
203,791	+		GFF2680	0.29	+0.0
203,791	+		GFF2680	0.29	+0.2
203,794	+		GFF2680	0.29	+0.4
203,812	+		GFF2680	0.31	-0.2
203,812	+		GFF2680	0.31	-0.1
203,812	+		GFF2680	0.31	+0.3
203,868	-		GFF2680	0.36	+0.3
204,025	+		GFF2680	0.51	-1.1
204,117	-		GFF2680	0.59	-0.1
204,120	+		GFF2680	0.60	+0.1
204,289	-		GFF2680	0.76	-0.0