Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2628
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
151,557 | - | GFF2626 | 0.83 | +0.7 | |
152,098 | + | GFF2627 | 0.62 | -0.0 | |
152,279 | + | GFF2627 | 0.88 | -0.2 | |
152,324 | + | +0.7 | |||
152,324 | + | +0.1 | |||
152,554 | - | +0.6 | |||
152,594 | + | +0.2 | |||
152,758 | - | GFF2628 | 0.17 | -0.2 | |
152,850 | + | GFF2628 | 0.23 | -0.8 | |
152,902 | + | GFF2628 | 0.26 | -0.0 | |
152,924 | - | GFF2628 | 0.28 | +1.1 | |
153,024 | + | GFF2628 | 0.34 | -0.4 | |
153,025 | - | GFF2628 | 0.34 | +0.1 | |
153,064 | - | GFF2628 | 0.37 | +0.0 | |
153,096 | - | GFF2628 | 0.39 | -0.2 | |
153,393 | - | GFF2628 | 0.58 | -0.1 | |
153,765 | + | GFF2628 | 0.82 | +0.7 | |
153,863 | - | GFF2628 | 0.88 | +0.4 | |
154,563 | + | +0.2 | |||
154,630 | - | GFF2629 | 0.18 | -0.8 | |
154,871 | + | GFF2629 | 0.55 | +0.7 | |
154,887 | + | GFF2629 | 0.57 | -0.6 |
Or see this region's nucleotide sequence