Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2481

Experiment: Dictyostellum sp.mixed culture-2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF2480 and GFF2481 are separated by 712 nucleotides GFF2480 - hypothetical protein, at 99,457 to 99,594 GFF2480 GFF2481 - hypothetical protein, at 100,307 to 100,426 GFF2481 Position (kb) 100 101Strain fitness (log2 ratio) -2 -1 0 1at 100.018 kb on - strandat 100.026 kb on - strandat 100.092 kb on - strandat 100.124 kb on + strandat 100.136 kb on + strandat 100.339 kb on + strand, within GFF2481at 100.512 kb on - strandat 100.656 kb on - strandat 100.748 kb on - strandat 100.758 kb on - strandat 100.773 kb on + strandat 100.773 kb on + strandat 100.796 kb on - strandat 100.796 kb on - strandat 100.873 kb on + strandat 100.874 kb on - strandat 100.930 kb on + strandat 100.930 kb on + strandat 100.931 kb on - strandat 100.931 kb on - strandat 100.938 kb on + strandat 101.234 kb on + strandat 101.271 kb on + strandat 101.354 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-2
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100,018 - -0.9
100,026 - -1.5
100,092 - -1.8
100,124 + -1.4
100,136 + -0.9
100,339 + GFF2481 0.27 -1.4
100,512 - -1.0
100,656 - -1.2
100,748 - -0.1
100,758 - -1.8
100,773 + -1.0
100,773 + -1.1
100,796 - -1.2
100,796 - -0.7
100,873 + -1.0
100,874 - -0.6
100,930 + -1.3
100,930 + -1.7
100,931 - -1.8
100,931 - -2.2
100,938 + -1.3
101,234 + -1.2
101,271 + -0.4
101,354 - -1.2

Or see this region's nucleotide sequence