Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2324

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
108,848	+		GFF2323	0.18	-0.2
108,949	+		GFF2323	0.27	-0.6
109,155	+		GFF2323	0.45	+0.4
109,275	+		GFF2323	0.55	-0.2
109,347	+		GFF2323	0.61	+0.2
109,348	-		GFF2323	0.61	-0.3
109,351	+		GFF2323	0.61	+0.1
109,352	-		GFF2323	0.62	-0.7
109,352	-		GFF2323	0.62	-0.7
109,390	-		GFF2323	0.65	-0.7
109,720	-				-0.7
109,752	-				-1.9
109,859	+				-4.2
109,955	+				-2.6
109,973	+				-3.1
110,023	+				-3.7
110,092	+		GFF2324	0.12	-3.2
110,093	-		GFF2324	0.12	-4.0
110,105	+		GFF2324	0.13	-5.9
110,164	-		GFF2324	0.15	-4.4
110,311	+		GFF2324	0.21	-5.1
110,336	-		GFF2324	0.22	-1.9
110,414	-		GFF2324	0.25	-5.9
110,506	-		GFF2324	0.29	-5.5
110,661	-		GFF2324	0.35	-4.9
110,661	-		GFF2324	0.35	-4.5
110,664	+		GFF2324	0.36	-3.0
110,747	+		GFF2324	0.39	-4.5
110,747	+		GFF2324	0.39	-4.3
110,748	-		GFF2324	0.39	-4.6
110,748	-		GFF2324	0.39	-3.1
110,875	+		GFF2324	0.44	-5.7
110,909	+		GFF2324	0.46	-4.0
111,297	-		GFF2324	0.62	-2.9
111,542	+		GFF2324	0.72	+0.2
111,542	+		GFF2324	0.72	+0.0
111,546	+		GFF2324	0.72	+0.1
111,546	+		GFF2324	0.72	-0.5
111,594	+		GFF2324	0.74	-0.0
111,595	-		GFF2324	0.74	-0.3
111,596	+		GFF2324	0.74	-0.2
111,728	+		GFF2324	0.79	-0.6
111,883	+		GFF2324	0.86	+0.3
111,884	-		GFF2324	0.86	-0.1
111,920	+		GFF2324	0.87	-0.2
111,920	+		GFF2324	0.87	-0.4
112,103	+				+0.1
112,234	-				+0.3
112,310	-				-0.5
112,310	-				+0.1
112,315	+				+0.1
112,316	-				-0.1
112,317	+				+0.0
112,318	-				+0.7
112,405	-				+0.3
112,457	+		GFF2325	0.13	+0.2
112,457	+		GFF2325	0.13	-0.2
112,457	+		GFF2325	0.13	-0.3
112,458	-		GFF2325	0.13	-0.4
112,557	+		GFF2325	0.24	+2.3
112,582	-		GFF2325	0.27	-0.8
112,591	+		GFF2325	0.28	+0.8
112,591	+		GFF2325	0.28	+0.1
112,798	+		GFF2325	0.52	-0.0
112,933	+		GFF2325	0.68	+0.5
112,934	-		GFF2325	0.68	-0.5
113,075	-		GFF2325	0.85	-0.2