Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2323

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
108,324	+		GFF2322	0.85	-0.9
108,382	-				-1.5
108,400	+				-1.7
108,444	+				-0.4
108,449	+				-0.5
108,504	-				+0.1
108,536	+				+0.3
108,537	-				-0.2
108,584	+				+0.2
108,636	+				+0.0
108,636	+				-0.1
108,636	+				-0.1
108,694	+				-0.8
108,694	+				+1.5
108,730	-				-0.0
108,733	+				+0.1
108,734	-				-1.2
108,735	+				-0.0
108,848	+		GFF2323	0.18	-0.2
108,949	+		GFF2323	0.27	-0.6
109,155	+		GFF2323	0.45	+0.4
109,275	+		GFF2323	0.55	-0.2
109,347	+		GFF2323	0.61	+0.2
109,348	-		GFF2323	0.61	-0.3
109,351	+		GFF2323	0.61	+0.1
109,352	-		GFF2323	0.62	-0.7
109,352	-		GFF2323	0.62	-0.7
109,390	-		GFF2323	0.65	-0.7
109,720	-				-0.7
109,752	-				-1.9
109,859	+				-4.2
109,955	+				-2.6
109,973	+				-3.1
110,023	+				-3.7
110,092	+		GFF2324	0.12	-3.2
110,093	-		GFF2324	0.12	-4.0
110,105	+		GFF2324	0.13	-5.9
110,164	-		GFF2324	0.15	-4.4
110,311	+		GFF2324	0.21	-5.1
110,336	-		GFF2324	0.22	-1.9
110,414	-		GFF2324	0.25	-5.9
110,506	-		GFF2324	0.29	-5.5
110,661	-		GFF2324	0.35	-4.9
110,661	-		GFF2324	0.35	-4.5
110,664	+		GFF2324	0.36	-3.0
110,747	+		GFF2324	0.39	-4.5
110,747	+		GFF2324	0.39	-4.3
110,748	-		GFF2324	0.39	-4.6
110,748	-		GFF2324	0.39	-3.1