Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2200
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
153 | + | -0.2 | |||
154 | - | +0.7 | |||
181 | + | GFF2199 | 0.16 | +0.7 | |
181 | + | GFF2199 | 0.16 | +0.0 | |
206 | - | GFF2199 | 0.31 | +1.5 | |
261 | + | GFF2199 | 0.66 | -1.0 | |
295 | + | GFF2199 | 0.87 | +0.7 | |
341 | + | +0.4 | |||
580 | + | -0.2 | |||
692 | - | GFF2200 | 0.36 | -0.7 | |
692 | - | GFF2200 | 0.36 | -1.0 | |
958 | + | -0.3 | |||
958 | + | -0.9 | |||
959 | - | -1.8 | |||
1,385 | - | -0.1 | |||
1,397 | + | +0.2 | |||
1,398 | - | +0.5 | |||
1,462 | - | GFF2201 | 0.17 | +1.1 | |
1,553 | - | GFF2201 | 0.46 | -0.6 | |
1,800 | + | GFF2202 | 0.71 | -0.1 | |
1,816 | + | GFF2202 | 0.85 | +0.2 |
Or see this region's nucleotide sequence