Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2036

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
1,961	+		GFF2035	0.31	-0.0
1,997	+		GFF2035	0.34	+0.5
2,144	+		GFF2035	0.46	-0.2
2,338	-		GFF2035	0.61	+0.3
2,470	+		GFF2035	0.72	-0.3
2,470	+		GFF2035	0.72	+0.5
2,506	+		GFF2035	0.75	+0.0
2,506	+		GFF2035	0.75	+0.3
2,506	+		GFF2035	0.75	-0.1
2,506	+		GFF2035	0.75	+0.2
2,507	-		GFF2035	0.75	+0.7
2,507	-		GFF2035	0.75	-0.3
2,569	+		GFF2035	0.80	+0.4
2,608	+		GFF2035	0.83	-0.7
2,609	-		GFF2035	0.83	+0.8
2,609	-		GFF2035	0.83	+0.8
2,654	+		GFF2035	0.87	-0.1
2,741	-				-0.1
2,741	-				-0.1
2,741	-				-1.0
2,844	+				+0.0
2,889	-				-0.1
2,889	-				-0.7
2,892	+				-0.0
2,913	+				+0.3
2,971	-		GFF2036	0.11	-0.0
3,220	+		GFF2036	0.41	-0.5
3,221	-		GFF2036	0.41	-0.6
3,296	+		GFF2036	0.50	+0.1
3,297	-		GFF2036	0.50	-0.3
3,468	-		GFF2036	0.71	-1.2
3,666	-				-0.2
4,066	-		GFF2037	0.13	-0.2
4,289	-		GFF2037	0.42	+0.8
4,318	-		GFF2037	0.46	-0.3
4,338	-		GFF2037	0.49	+0.6
4,369	+		GFF2037	0.53	-0.1
4,377	-		GFF2037	0.54	+0.3
4,427	+		GFF2037	0.60	-0.4
4,443	+		GFF2037	0.63	+0.5
4,462	-		GFF2037	0.65	+0.5
4,462	-		GFF2037	0.65	-0.0
4,466	-		GFF2037	0.66	-0.3
4,468	+		GFF2037	0.66	+0.2
4,488	-		GFF2037	0.69	+0.2
4,536	+		GFF2037	0.75	+1.2
4,560	+		GFF2037	0.78	-0.7
4,700	+				-0.3