Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1928

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
121,341	-		GFF1927	0.41	-0.8
121,548	-		GFF1927	0.54	+1.0
121,548	-		GFF1927	0.54	+0.6
121,549	+		GFF1927	0.54	-0.9
121,549	+		GFF1927	0.54	+0.1
121,549	+		GFF1927	0.54	-0.3
121,550	-		GFF1927	0.54	-0.5
121,550	-		GFF1927	0.54	-1.6
121,550	-		GFF1927	0.54	-0.7
121,550	-		GFF1927	0.54	-0.7
121,550	-		GFF1927	0.54	-0.5
121,554	-		GFF1927	0.55	-1.2
121,628	+		GFF1927	0.59	-1.3
121,629	-		GFF1927	0.59	+0.1
121,630	+		GFF1927	0.60	-0.7
121,630	+		GFF1927	0.60	-0.3
121,631	-		GFF1927	0.60	-0.2
121,742	-		GFF1927	0.67	-0.7
121,787	+		GFF1927	0.70	-0.4
121,877	+		GFF1927	0.76	+1.5
121,908	-		GFF1927	0.78	+1.0
121,941	-		GFF1927	0.80	-1.1
121,971	-		GFF1927	0.82	-0.4
122,106	-				-0.2
122,123	+				+0.2
122,123	+				+1.8
122,191	+				+0.1
122,243	+				-0.2
122,244	-				-0.3
122,407	-		GFF1928	0.26	-0.2
122,407	-		GFF1928	0.26	-0.1
122,518	+		GFF1928	0.48	+0.7
122,586	+		GFF1928	0.62	-1.2
122,630	+		GFF1928	0.71	-0.6
122,636	+		GFF1928	0.73	-0.9
122,637	-		GFF1928	0.73	-0.4
122,639	+		GFF1928	0.73	-0.2
122,769	+				-0.8
122,770	-				+0.1
123,092	-				+0.2
123,094	-				+0.3
123,228	+		GFF1930	0.22	-0.1
123,312	+		GFF1930	0.34	-1.9