Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1900

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
93,409	-		GFF1898	0.84	+0.2
93,512	+				-0.1
93,557	+				+0.3
93,582	-		GFF1899	0.11	-0.4
93,594	+		GFF1899	0.13	+0.2
93,671	-		GFF1899	0.30	+0.1
93,801	+		GFF1899	0.59	+1.5
93,854	-		GFF1899	0.70	+0.5
93,949	-				+0.5
94,086	-				+0.4
94,154	+				-0.3
94,154	+				-0.1
94,154	+				-0.5
94,154	+				+0.0
94,154	+				-0.3
94,155	-				-0.2
94,155	-				+1.3
94,202	+				-0.2
94,203	-				+0.3
94,250	+				-0.4
94,310	-				-0.7
94,318	+				+1.5
94,318	+				+0.0
94,319	-				-0.9
94,323	-				-0.7
94,338	-				-0.9
94,548	-		GFF1900	0.18	-0.7
94,583	-		GFF1900	0.21	-0.4
94,583	-		GFF1900	0.21	+0.1
94,583	-		GFF1900	0.21	-1.7
94,607	-		GFF1900	0.23	-1.9
94,625	+		GFF1900	0.25	-1.1
94,812	+		GFF1900	0.40	-0.8
94,813	-		GFF1900	0.40	-0.4
94,841	+		GFF1900	0.43	-0.9
94,842	-		GFF1900	0.43	-0.2
94,890	+		GFF1900	0.47	-0.2
94,891	-		GFF1900	0.47	+1.5
94,946	+		GFF1900	0.51	+0.2
95,190	+		GFF1900	0.72	-1.4
95,190	+		GFF1900	0.72	-2.8
95,205	+		GFF1900	0.73	-2.4
95,265	+		GFF1900	0.78	-1.9
95,277	+		GFF1900	0.79	-0.1
95,617	-				-2.1
95,619	+				-1.2
95,622	+				-1.0
95,623	-				-1.0
95,946	+		GFF1901	0.16	-1.6
96,058	-		GFF1901	0.21	-0.1
96,115	-		GFF1901	0.24	-0.1
96,390	+		GFF1901	0.36	-1.1
96,434	+		GFF1901	0.39	-0.3
96,498	-		GFF1901	0.41	-1.0