Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1895

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
88,821	-		GFF1894	0.36	+0.9
88,889	-		GFF1894	0.41	+0.4
89,102	-		GFF1894	0.59	-0.7
89,239	+		GFF1894	0.70	+0.3
89,261	+		GFF1894	0.72	-0.3
89,303	+		GFF1894	0.76	+0.0
89,381	+		GFF1894	0.82	+0.0
89,381	+		GFF1894	0.82	-0.2
89,381	+		GFF1894	0.82	+0.7
89,382	-		GFF1894	0.82	+0.6
89,382	-		GFF1894	0.82	+0.0
89,382	-		GFF1894	0.82	+0.2
89,792	-		GFF1895	0.17	+0.1
89,792	-		GFF1895	0.17	+0.3
89,891	+		GFF1895	0.33	+0.3
89,892	-		GFF1895	0.33	+1.4
89,911	-		GFF1895	0.36	+0.1
89,911	-		GFF1895	0.36	+0.2
89,969	+		GFF1895	0.46	+0.4
90,049	+		GFF1895	0.59	-0.7
90,221	+		GFF1895	0.88	+0.3
90,226	+		GFF1895	0.89	+0.3
90,479	-				+0.5
90,479	-				-0.0
90,531	-				+1.1
90,698	+		GFF1896	0.17	+0.2
90,698	+		GFF1896	0.17	-0.5
90,699	-		GFF1896	0.17	+0.7
90,701	-		GFF1896	0.17	+0.0
90,806	+		GFF1896	0.23	+0.0
90,852	-		GFF1896	0.26	-1.3