Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1889

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
81,960	-		GFF1887	0.68	-0.3
81,974	-		GFF1887	0.70	-1.2
81,996	+		GFF1887	0.71	-0.7
81,997	-		GFF1887	0.71	-1.0
81,997	-		GFF1887	0.71	-1.9
82,036	+		GFF1887	0.74	-1.4
82,036	+		GFF1887	0.74	-0.9
82,037	-		GFF1887	0.74	-1.2
82,086	+		GFF1887	0.78	-1.0
82,653	-		GFF1888	0.55	-0.5
82,653	-		GFF1888	0.55	-0.1
82,712	+		GFF1888	0.67	-2.2
82,813	+		GFF1888	0.87	-1.0
82,814	-		GFF1888	0.87	-1.5
82,882	+				-1.9
82,901	+				-1.1
83,021	+				-1.8
83,022	-				-1.6
83,045	-				-1.2
83,047	+				-0.9
83,226	-		GFF1889	0.19	-0.7
83,293	+		GFF1889	0.23	-0.8
83,293	+		GFF1889	0.23	-1.7
83,293	+		GFF1889	0.23	-1.0
83,293	+		GFF1889	0.23	-0.8
83,294	-		GFF1889	0.23	-0.8
83,366	+		GFF1889	0.27	-1.0
83,444	-		GFF1889	0.31	-1.4
83,477	+		GFF1889	0.33	-1.1
83,824	+		GFF1889	0.52	-0.9
83,855	-		GFF1889	0.54	-0.6
83,871	-		GFF1889	0.55	-0.6
83,881	+		GFF1889	0.55	-0.4
83,881	+		GFF1889	0.55	-1.5
83,882	-		GFF1889	0.56	-1.2
83,886	-		GFF1889	0.56	-0.2
83,886	-		GFF1889	0.56	-1.5
83,886	-		GFF1889	0.56	-0.5
83,985	-		GFF1889	0.61	-2.0
83,985	-		GFF1889	0.61	-1.4
84,038	+		GFF1889	0.64	-0.7
84,039	-		GFF1889	0.64	-0.9
84,039	-		GFF1889	0.64	-1.4
84,274	+		GFF1889	0.77	-1.2
84,354	-		GFF1889	0.82	-1.6
84,493	-		GFF1889	0.89	-1.2
84,660	+				-0.2
84,937	+		GFF1890	0.25	-1.1
84,938	-		GFF1890	0.25	-0.8
84,940	-		GFF1890	0.26	-1.3
84,972	+		GFF1890	0.30	-1.2
84,972	+		GFF1890	0.30	-0.0
84,972	+		GFF1890	0.30	-1.1
84,973	-		GFF1890	0.31	-1.2
84,973	-		GFF1890	0.31	-1.0
84,973	-		GFF1890	0.31	-0.9
84,994	+		GFF1890	0.34	-0.3
84,994	+		GFF1890	0.34	-0.2
85,027	-		GFF1890	0.39	-1.4
85,093	-		GFF1890	0.49	-1.6
85,235	+		GFF1890	0.70	-0.3
85,235	+		GFF1890	0.70	-0.6
85,236	-		GFF1890	0.70	-0.8
85,239	+		GFF1890	0.71	-1.0
85,240	-		GFF1890	0.71	-2.3
85,240	-		GFF1890	0.71	-1.4
85,410	-				-1.3
85,435	+				+0.1
85,435	+				-1.0
85,545	+		GFF1891	0.22	-0.8
85,641	+		GFF1891	0.43	-2.8