Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1885

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
76,336	+		GFF1883	0.26	+0.5
76,421	-		GFF1883	0.41	-1.1
76,600	+		GFF1883	0.74	-0.9
76,600	+		GFF1883	0.74	+0.3
76,601	-		GFF1883	0.74	-0.6
76,655	-		GFF1883	0.84	-1.4
76,679	+		GFF1883	0.88	-1.3
76,728	-				-1.4
76,757	+				-1.0
76,857	-		GFF1884	0.19	-1.3
77,157	+		GFF1884	0.74	-2.3
77,400	+				-1.7
77,401	-				-0.3
77,411	-		GFF1885	0.10	-1.4
77,566	+		GFF1885	0.26	-1.5
77,766	-		GFF1885	0.46	-2.9
77,769	-		GFF1885	0.47	-0.9
77,824	+		GFF1885	0.52	-2.0
77,870	-		GFF1885	0.57	-1.5
77,975	+		GFF1885	0.68	-0.5
78,152	-		GFF1885	0.86	-1.6
78,429	+				-1.4
78,429	+				-1.6
78,512	-				-0.8
78,567	+		GFF1886	0.10	-0.3
78,567	+		GFF1886	0.10	-0.3
78,568	-		GFF1886	0.10	-2.4
78,568	-		GFF1886	0.10	-1.3
78,580	+		GFF1886	0.11	+0.5
78,580	+		GFF1886	0.11	-1.2
79,082	-		GFF1886	0.29	-1.0
79,082	-		GFF1886	0.29	-1.7
79,099	-		GFF1886	0.30	-1.3
79,099	-		GFF1886	0.30	-2.2