Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1844

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
33,998	-				+0.3
33,999	+				-1.1
33,999	+				-0.9
34,012	-				+0.2
34,077	-		GFF1843	0.14	-0.8
34,085	-		GFF1843	0.15	+0.8
34,157	-		GFF1843	0.22	+0.4
34,157	-		GFF1843	0.22	+0.4
34,231	-		GFF1843	0.29	+0.4
34,236	+		GFF1843	0.29	-1.3
34,237	-		GFF1843	0.29	-0.2
34,291	-		GFF1843	0.34	-0.0
34,291	-		GFF1843	0.34	-0.3
34,564	+		GFF1843	0.60	+0.8
34,696	-		GFF1843	0.72	+0.4
34,865	-		GFF1843	0.88	+0.4
34,999	+				-0.3
35,138	+		GFF1844	0.10	+0.2
35,139	-		GFF1844	0.10	+0.2
35,139	-		GFF1844	0.10	+0.3
35,272	+		GFF1844	0.20	-0.5
35,298	-		GFF1844	0.22	+1.7
35,298	-		GFF1844	0.22	-0.7
35,298	-		GFF1844	0.22	-0.3
35,458	+		GFF1844	0.34	+0.1
35,587	+		GFF1844	0.43	-0.3
35,588	-		GFF1844	0.43	-1.0
35,615	-		GFF1844	0.45	+0.5
35,784	-		GFF1844	0.58	+0.6
35,786	-		GFF1844	0.58	-1.2
36,130	+		GFF1844	0.83	-0.0
36,131	-		GFF1844	0.83	+0.4
36,189	+		GFF1844	0.88	+0.7
36,189	+		GFF1844	0.88	+1.1
36,347	+				-0.4
36,357	-				+0.2
36,451	-				+0.1
36,451	-				+0.2
36,456	+				+0.2
36,456	+				-0.4
36,476	+				+0.4
36,486	-				-0.4
36,582	-				+0.1
36,752	-				-0.1
36,752	-				+0.2
36,753	+				+0.1
36,907	+		GFF1845	0.17	+0.9
36,910	+		GFF1845	0.17	+1.2