Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1825

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
6,436	+				+0.5
6,436	+				+0.4
6,668	-		GFF1824	0.45	+1.0
6,723	-		GFF1824	0.56	-0.6
6,723	-		GFF1824	0.56	-1.1
6,731	+		GFF1824	0.57	-0.1
6,732	-		GFF1824	0.58	-0.1
6,732	-		GFF1824	0.58	+1.0
6,732	-		GFF1824	0.58	+0.1
6,869	+		GFF1824	0.85	-0.5
6,869	+		GFF1824	0.85	-0.0
6,869	+		GFF1824	0.85	+0.2
6,869	+		GFF1824	0.85	+0.3
6,896	+				-0.2
6,897	-				-0.1
6,924	+				-0.5
7,327	-		GFF1825	0.10	+0.4
7,334	-		GFF1825	0.11	-0.2
7,480	-		GFF1825	0.20	+0.0
7,480	-		GFF1825	0.20	+0.5
7,480	-		GFF1825	0.20	-0.9
7,640	+		GFF1825	0.30	+0.4
7,641	-		GFF1825	0.30	+0.5
7,738	-		GFF1825	0.35	+0.3
7,997	-		GFF1825	0.51	+0.5
8,138	-		GFF1825	0.60	+0.0
8,243	-		GFF1825	0.66	+1.5
8,243	-		GFF1825	0.66	+0.4
8,249	+		GFF1825	0.67	+0.1
8,250	-		GFF1825	0.67	-0.2
8,444	+		GFF1825	0.78	+0.3
8,445	-		GFF1825	0.78	-0.5
8,445	-		GFF1825	0.78	-1.7
8,447	+		GFF1825	0.79	+0.3
8,448	-		GFF1825	0.79	-0.1
8,802	+				+0.6
8,802	+				-0.4
8,860	-				-0.6
9,018	+		GFF1826	0.22	-0.8
9,019	-		GFF1826	0.22	-0.1
9,228	+		GFF1826	0.54	-0.3
9,229	-		GFF1826	0.55	-0.2
9,229	-		GFF1826	0.55	-0.4
9,266	+		GFF1826	0.60	+1.2
9,267	-		GFF1826	0.60	+1.1
9,292	+		GFF1826	0.64	+0.2
9,292	+		GFF1826	0.64	+0.4
9,427	-		GFF1826	0.85	-0.1
9,529	-				+0.6
9,557	+				+0.4