Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1808

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
30,842	-		GFF1807	0.54	-0.9
30,842	-		GFF1807	0.54	-0.4
30,844	+		GFF1807	0.54	-0.1
30,845	-		GFF1807	0.54	-0.2
30,947	+		GFF1807	0.60	-0.3
31,012	+		GFF1807	0.64	+0.7
31,019	-		GFF1807	0.65	-1.6
31,065	-		GFF1807	0.68	-0.2
31,113	-		GFF1807	0.70	-0.3
31,135	+		GFF1807	0.72	+0.0
31,135	+		GFF1807	0.72	-0.6
31,136	-		GFF1807	0.72	-0.2
31,183	+		GFF1807	0.75	-1.4
31,184	-		GFF1807	0.75	-0.1
31,184	-		GFF1807	0.75	-0.3
31,184	-		GFF1807	0.75	+0.8
31,184	-		GFF1807	0.75	-0.3
31,190	+		GFF1807	0.75	-0.5
31,192	+		GFF1807	0.75	-0.1
31,193	-		GFF1807	0.75	-0.3
31,193	-		GFF1807	0.75	-0.2
31,262	+		GFF1807	0.80	+0.6
31,263	-		GFF1807	0.80	-0.2
31,345	+		GFF1807	0.85	-0.7
31,346	-		GFF1807	0.85	-0.4
31,414	-		GFF1807	0.89	-0.7
31,419	-		GFF1807	0.89	-0.3
31,419	-		GFF1807	0.89	-0.7
31,419	-		GFF1807	0.89	-0.3
31,534	+				-0.9
31,535	-				-0.0
31,674	+				-0.0
31,759	+				+0.1
32,174	-		GFF1808	0.32	-3.6
32,174	-		GFF1808	0.32	-3.9
32,566	+		GFF1808	0.65	-6.2
32,683	-		GFF1808	0.75	-5.1
32,683	-		GFF1808	0.75	-2.2
32,856	+				-5.0
32,856	+				-2.2
32,980	-				-0.2
33,011	-				+0.5
33,092	+				+0.1
33,108	-				+0.2
33,319	-		GFF1809	0.16	+0.2
33,418	-		GFF1809	0.23	+0.8
33,501	+		GFF1809	0.28	+0.3
33,520	+		GFF1809	0.29	-0.1
33,718	-		GFF1809	0.43	+0.6