Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1737
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
37,316 | + | -0.3 | |||
37,632 | + | GFF1736 | 0.32 | +0.2 | |
37,667 | + | GFF1736 | 0.36 | -0.9 | |
38,184 | + | -0.5 | |||
38,248 | + | +0.3 | |||
38,248 | + | +0.2 | |||
38,257 | + | +0.2 | |||
38,380 | + | GFF1737 | 0.11 | -1.5 | |
38,380 | + | GFF1737 | 0.11 | -2.2 | |
38,559 | + | GFF1737 | 0.33 | -1.4 | |
38,647 | + | GFF1737 | 0.44 | -1.3 | |
38,997 | + | GFF1737 | 0.87 | -1.8 | |
39,001 | + | GFF1737 | 0.88 | -2.2 | |
39,806 | + | -0.0 | |||
39,880 | + | +0.2 | |||
39,886 | + | -0.1 | |||
39,935 | + | -0.1 | |||
39,942 | + | -0.3 | |||
39,993 | + | +0.3 | |||
40,029 | + | GFF1739 | 0.14 | +0.4 |
Or see this region's nucleotide sequence