Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1734
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
34,229 | - | GFF1733 | 0.40 | -0.3 | |
34,402 | + | GFF1733 | 0.53 | -0.2 | |
34,449 | + | GFF1733 | 0.56 | +0.5 | |
34,449 | + | GFF1733 | 0.56 | -0.3 | |
34,537 | + | GFF1733 | 0.63 | +0.3 | |
34,537 | + | GFF1733 | 0.63 | +0.0 | |
34,598 | - | GFF1733 | 0.67 | +0.2 | |
34,610 | - | GFF1733 | 0.68 | -0.1 | |
34,626 | + | GFF1733 | 0.69 | +1.2 | |
34,643 | + | GFF1733 | 0.71 | -0.3 | |
34,643 | + | GFF1733 | 0.71 | -0.0 | |
34,644 | - | GFF1733 | 0.71 | -0.3 | |
34,880 | + | GFF1733 | 0.88 | -0.5 | |
34,881 | - | GFF1733 | 0.88 | +0.4 | |
35,006 | + | +0.1 | |||
35,134 | + | -0.2 | |||
35,134 | + | -0.1 | |||
35,134 | + | +0.4 | |||
35,134 | + | -0.3 | |||
35,136 | + | -0.2 | |||
35,136 | + | +0.2 | |||
35,136 | + | -0.3 | |||
35,136 | + | +0.1 | |||
35,137 | - | -0.6 | |||
35,137 | - | -0.0 | |||
35,137 | - | -0.7 | |||
35,170 | + | -0.3 | |||
35,170 | + | -0.5 | |||
35,213 | + | -1.4 | |||
35,213 | + | +0.0 | |||
35,730 | + | GFF1734 | 0.50 | -0.6 | |
35,780 | + | GFF1734 | 0.54 | -1.0 | |
35,839 | + | GFF1734 | 0.60 | +0.1 | |
36,059 | + | GFF1734 | 0.81 | -1.4 | |
36,129 | + | GFF1734 | 0.88 | -1.3 | |
36,165 | + | -0.8 | |||
36,481 | + | -1.6 | |||
36,566 | + | GFF1735 | 0.18 | -2.8 | |
36,594 | + | GFF1735 | 0.21 | -1.4 | |
36,788 | + | GFF1735 | 0.41 | -2.3 | |
36,939 | + | GFF1735 | 0.57 | -1.3 | |
36,939 | + | GFF1735 | 0.57 | -1.8 | |
36,939 | + | GFF1735 | 0.57 | -1.3 | |
37,016 | + | GFF1735 | 0.65 | -1.5 | |
37,019 | + | GFF1735 | 0.66 | -2.1 | |
37,082 | + | GFF1735 | 0.72 | -1.8 | |
37,146 | + | GFF1735 | 0.79 | +0.6 | |
37,146 | + | GFF1735 | 0.79 | -0.1 | |
37,170 | + | GFF1735 | 0.81 | -0.5 | |
37,170 | + | GFF1735 | 0.81 | -0.4 |
Or see this region's nucleotide sequence