Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1709

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
6,762	+		GFF1708	0.34	-0.4
6,763	-		GFF1708	0.34	+0.0
6,831	+		GFF1708	0.39	-0.2
6,831	+		GFF1708	0.39	+0.2
7,033	+		GFF1708	0.52	-3.1
7,154	-		GFF1708	0.60	-0.1
7,166	-		GFF1708	0.61	-0.2
7,167	+		GFF1708	0.61	+1.5
7,167	+		GFF1708	0.61	-0.2
7,168	-		GFF1708	0.61	+0.4
7,168	-		GFF1708	0.61	+0.4
7,168	-		GFF1708	0.61	+0.3
7,168	-		GFF1708	0.61	-0.9
7,168	-		GFF1708	0.61	+0.3
7,505	-		GFF1708	0.83	-0.6
7,593	+		GFF1708	0.89	-0.2
7,593	+		GFF1708	0.89	+0.3
7,594	-		GFF1708	0.89	-0.2
7,605	-				+0.1
7,720	+				-0.2
8,027	+		GFF1709	0.63	-1.7
8,028	-		GFF1709	0.64	-2.8
8,115	-		GFF1709	0.84	-0.1
8,121	-		GFF1709	0.86	+0.1
8,163	+				-0.8
8,163	+				+0.1
8,222	-				+0.2
8,240	-				+0.6
8,307	+				-0.6
8,322	+				-1.1
8,394	+				+1.8
8,399	-				-0.3
8,496	-				-0.0
8,535	+				-0.4
8,565	+		GFF1710	0.10	-0.0
8,565	+		GFF1710	0.10	+0.7
8,566	-		GFF1710	0.10	-0.2
8,566	-		GFF1710	0.10	-0.6
8,689	-		GFF1710	0.17	-0.2
8,696	+		GFF1710	0.17	+1.0
8,696	+		GFF1710	0.17	-0.1
8,773	+		GFF1710	0.21	-1.4
8,810	+		GFF1710	0.23	-0.2
8,810	+		GFF1710	0.23	-0.2
8,810	+		GFF1710	0.23	-0.7
8,810	+		GFF1710	0.23	+0.3
8,811	-		GFF1710	0.23	-0.0
8,811	-		GFF1710	0.23	-0.2
8,811	-		GFF1710	0.23	-0.0
8,811	-		GFF1710	0.23	+0.1
8,811	-		GFF1710	0.23	-1.0
8,811	-		GFF1710	0.23	+0.4
8,813	-		GFF1710	0.23	+0.2
8,895	+		GFF1710	0.28	-0.0
8,994	+		GFF1710	0.33	-0.4
9,063	-		GFF1710	0.37	-0.2
9,085	-		GFF1710	0.38	-1.4
9,108	+		GFF1710	0.39	-0.2
9,147	-		GFF1710	0.41	-1.4