Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1634

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
19,472	-		GFF1633	0.40	+0.1
20,323	-				+0.3
20,339	-				+0.5
20,369	+				-0.4
20,498	+				-3.3
20,625	+		GFF1634	0.22	-2.9
20,634	-		GFF1634	0.23	-4.8
20,634	-		GFF1634	0.23	-2.6
20,708	+		GFF1634	0.30	-3.1
20,709	-		GFF1634	0.30	-3.2
20,769	-		GFF1634	0.37	-2.4
20,874	-		GFF1634	0.47	-1.9
20,899	-		GFF1634	0.50	-4.1
21,357	-				-2.8
21,425	-				+0.3
21,429	+				+0.2
21,547	+				-0.1
21,630	+				-0.4
21,631	-				+0.4
21,745	+		GFF1635	0.18	+0.3
21,757	+		GFF1635	0.19	+0.6
21,970	-		GFF1635	0.36	+0.1
22,006	+		GFF1635	0.38	+0.1
22,040	-		GFF1635	0.41	-0.3
22,040	-		GFF1635	0.41	-0.0
22,040	-		GFF1635	0.41	-0.5
22,242	-		GFF1635	0.56	+0.4
22,242	-		GFF1635	0.56	+0.4
22,254	-		GFF1635	0.57	-0.7
22,331	-		GFF1635	0.63	-0.1