Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF158

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
148,917	-		GFF157	0.51	-0.0
148,926	-		GFF157	0.53	-0.7
149,036	-		GFF157	0.76	-1.3
149,040	-		GFF157	0.77	+0.2
149,163	-				+0.6
149,326	+				-0.7
149,326	+				-0.0
149,426	+				+0.2
149,434	-				-0.7
149,434	-				-0.2
149,461	-				-0.3
149,479	+				-0.4
149,593	-				-0.1
149,698	+				+0.1
149,986	+		GFF158	0.24	-1.4
150,043	-		GFF158	0.29	-1.2
150,108	-		GFF158	0.36	-1.2
150,204	-		GFF158	0.45	-0.8
150,479	+		GFF158	0.73	-0.9
150,510	-		GFF158	0.76	-0.4
150,510	-		GFF158	0.76	+0.0
150,527	+		GFF158	0.77	-2.4
150,528	-		GFF158	0.78	-1.4
150,614	+		GFF158	0.86	-1.7
150,614	+		GFF158	0.86	-0.2
150,672	-				-0.8
150,699	-				-1.3
150,699	-				-1.6
150,775	+				-1.8
150,822	+				-2.7
150,823	-				+0.4
150,916	+				+0.6
150,984	-		GFF159	0.48	+0.3
150,993	+		GFF159	0.55	+0.7
151,169	-		GFF160	0.27	+0.2
151,171	-		GFF160	0.27	+0.4
151,219	+		GFF160	0.37	-1.2
151,444	+		GFF160	0.82	+0.1
151,445	-		GFF160	0.82	+0.4
151,447	-		GFF160	0.83	+0.5
151,508	+				+2.5
151,648	-				+0.6
151,724	+		GFF161	0.12	-0.5
151,725	-		GFF161	0.12	-0.2