Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1503

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
8,492	+		GFF1502	0.62	-1.9
8,546	+		GFF1502	0.65	-2.0
8,598	+		GFF1502	0.67	-2.1
8,598	+		GFF1502	0.67	-1.7
8,599	-		GFF1502	0.67	-1.0
8,679	-		GFF1502	0.71	-1.0
8,679	-		GFF1502	0.71	-1.2
8,714	+		GFF1502	0.72	-2.2
8,816	+		GFF1502	0.77	-2.7
8,816	+		GFF1502	0.77	-2.0
8,843	+		GFF1502	0.78	-2.5
8,843	+		GFF1502	0.78	-0.8
8,994	+		GFF1502	0.85	+0.8
9,049	-		GFF1502	0.88	-1.5
9,049	-		GFF1502	0.88	+0.3
9,056	+		GFF1502	0.88	-2.1
9,057	-		GFF1502	0.88	-0.7
9,229	+				-1.2
9,242	+				-0.1
9,309	+				+0.1
9,346	+				+0.2
9,462	+				-0.9
9,462	+				-2.9
9,462	+				+0.5
9,463	-				-0.1
9,463	-				-1.0
9,463	-				-0.5
9,480	+				-0.1
9,480	+				-0.5
9,640	-		GFF1503	0.25	+1.3
9,725	+		GFF1503	0.34	-1.8
9,805	+		GFF1503	0.43	+1.3
9,841	+		GFF1503	0.47	-1.7
10,135	+		GFF1503	0.81	-0.6
10,135	+		GFF1503	0.81	-0.5
10,135	+		GFF1503	0.81	-0.3
10,139	+		GFF1503	0.81	-1.2
10,154	+		GFF1503	0.83	-0.0
10,481	+				+0.5
10,826	+		GFF1504	0.18	+2.9
10,826	+		GFF1504	0.18	-0.6