Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1411
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
58,862 | - | +0.0 | |||
58,862 | - | -0.9 | |||
58,862 | - | +0.3 | |||
58,862 | - | -0.6 | |||
58,864 | - | -2.1 | |||
58,911 | - | -5.2 | |||
58,951 | - | GFF1411 | 0.13 | -2.0 | |
59,080 | + | GFF1411 | 0.48 | -0.8 | |
59,092 | + | GFF1411 | 0.51 | -2.5 | |
59,097 | - | GFF1411 | 0.53 | -1.4 | |
59,097 | - | GFF1411 | 0.53 | -2.4 | |
59,127 | - | GFF1411 | 0.61 | -2.1 | |
59,209 | + | GFF1411 | 0.83 | -1.7 | |
59,209 | + | GFF1411 | 0.83 | -5.4 | |
59,986 | - | +1.5 | |||
60,109 | + | +0.2 | |||
60,228 | + | -0.6 |
Or see this region's nucleotide sequence