Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF123

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
112,022	+		GFF122	0.69	-3.7
112,240	+		GFF122	0.77	-1.3
112,244	+		GFF122	0.77	-2.1
112,245	-		GFF122	0.77	-2.3
112,245	-		GFF122	0.77	-0.8
112,359	-		GFF122	0.82	-1.5
112,499	-		GFF122	0.87	+0.7
112,499	-		GFF122	0.87	-1.9
112,499	-		GFF122	0.87	-0.8
112,672	+				-1.4
112,676	+				-1.2
112,677	-				-3.6
112,747	+				-1.7
112,867	+				-1.4
112,884	+				-2.4
112,926	+				-1.6
113,162	+		GFF123	0.20	-2.2
113,210	-		GFF123	0.26	-0.3
113,259	-		GFF123	0.33	+0.3
113,397	-		GFF123	0.51	+0.4
113,405	+		GFF123	0.52	-2.6
113,853	-				+1.1
113,870	-				+0.1
114,084	+				+0.7
114,295	+				+0.1
114,336	+				+0.3
114,393	+				+0.1
114,394	-				-0.5
114,491	-		GFF124	0.11	-0.2
114,588	+		GFF124	0.18	-0.2
114,589	-		GFF124	0.18	+0.0
114,651	-		GFF124	0.23	+0.1
114,682	-		GFF124	0.25	-0.3
114,686	-		GFF124	0.25	+0.6