Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF116

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
103,097	-				-1.0
103,208	-				-1.1
103,314	-				-0.8
103,317	+				-2.5
103,326	-				-0.4
103,344	-				-0.3
103,430	+				+0.5
103,461	+				+0.2
103,469	+				+0.5
103,498	-				+0.2
103,519	-				+0.4
103,545	+				+0.2
103,618	+				+0.1
103,925	-		GFF116	0.19	-0.3
104,288	+		GFF116	0.41	-0.1
104,289	-		GFF116	0.41	-0.3
104,289	-		GFF116	0.41	-0.5
104,318	+		GFF116	0.43	-0.4
104,336	-		GFF116	0.44	-0.5
104,355	-		GFF116	0.45	-0.2
104,358	+		GFF116	0.45	-0.1
104,435	+		GFF116	0.50	-0.1
104,435	+		GFF116	0.50	+0.5
104,435	+		GFF116	0.50	+0.4
104,436	-		GFF116	0.50	-1.4
104,540	-		GFF116	0.57	-0.0
104,663	-		GFF116	0.64	-1.4
104,665	+		GFF116	0.64	+0.4
104,666	-		GFF116	0.64	+1.9
104,836	+		GFF116	0.75	-0.4
104,875	+		GFF116	0.77	-0.8
104,984	-		GFF116	0.84	-0.0
105,082	+				-0.8
105,144	+				-0.2
105,499	-		GFF117	0.31	+0.3
105,511	+		GFF117	0.32	-1.3
105,512	-		GFF117	0.32	+0.1
105,625	+		GFF117	0.46	-0.0
105,629	-		GFF117	0.47	-0.1
105,650	-		GFF117	0.50	+0.1
105,650	-		GFF117	0.50	+0.1
105,655	-		GFF117	0.50	-0.6
105,672	-		GFF117	0.52	-0.1
105,672	-		GFF117	0.52	-0.1
105,693	-		GFF117	0.55	-0.1
105,699	+		GFF117	0.56	+0.3
105,759	-		GFF117	0.63	+0.1
105,857	-		GFF117	0.76	-0.1
105,955	+		GFF117	0.88	-0.3
105,956	-		GFF117	0.88	+1.7
105,960	-		GFF117	0.89	+0.4
106,003	+				+0.5
106,003	+				+0.0