Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF115
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
99,693 | - | +0.1 | |||
100,716 | + | -0.6 | |||
100,749 | - | +0.9 | |||
100,866 | + | -1.9 | |||
101,053 | - | GFF115 | 0.17 | -0.4 | |
101,053 | - | GFF115 | 0.17 | -1.8 | |
101,379 | - | GFF115 | 0.29 | -3.1 | |
101,413 | - | GFF115 | 0.31 | -1.8 | |
101,779 | - | GFF115 | 0.45 | +0.3 | |
101,842 | - | GFF115 | 0.48 | -1.1 | |
102,042 | + | GFF115 | 0.56 | -2.0 | |
102,287 | - | GFF115 | 0.66 | -1.8 | |
102,394 | - | GFF115 | 0.70 | -3.8 | |
103,097 | - | -1.0 | |||
103,208 | - | -1.1 | |||
103,314 | - | -0.8 | |||
103,317 | + | -2.5 | |||
103,326 | - | -0.4 | |||
103,344 | - | -0.3 | |||
103,430 | + | +0.5 | |||
103,461 | + | +0.2 | |||
103,469 | + | +0.5 | |||
103,498 | - | +0.2 | |||
103,519 | - | +0.4 | |||
103,545 | + | +0.2 | |||
103,618 | + | +0.1 | |||
103,925 | - | GFF116 | 0.19 | -0.3 |
Or see this region's nucleotide sequence