Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF109

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
93,961	-		GFF107	0.87	+0.5
93,961	-		GFF107	0.87	+0.1
94,046	-				+0.2
94,049	+				+0.1
94,050	-				-0.1
94,151	+				+0.1
94,155	+				+0.2
94,156	-				-0.1
94,197	+		GFF108	0.13	-0.0
94,198	-		GFF108	0.13	-0.3
94,206	+		GFF108	0.14	-1.2
94,207	-		GFF108	0.14	-0.1
94,209	-		GFF108	0.14	+0.1
94,221	+		GFF108	0.16	+0.3
94,425	-		GFF108	0.42	-0.0
94,433	+		GFF108	0.43	+1.2
94,445	+		GFF108	0.44	-0.4
94,445	+		GFF108	0.44	+0.2
94,446	-		GFF108	0.44	-0.2
94,446	-		GFF108	0.44	+0.0
94,446	-		GFF108	0.44	+0.2
94,478	-		GFF108	0.48	-0.4
94,545	+		GFF108	0.57	-0.2
94,623	-		GFF108	0.66	+0.2
94,650	-		GFF108	0.70	+1.1
94,650	-		GFF108	0.70	+0.1
94,656	-		GFF108	0.71	+0.1
94,667	+		GFF108	0.72	+0.0
94,709	-		GFF108	0.77	+0.4
94,751	+		GFF108	0.83	+0.2
94,773	+		GFF108	0.85	+0.0
94,773	+		GFF108	0.85	+0.2
94,774	-		GFF108	0.85	-0.8
95,055	+		GFF109	0.18	-1.7
95,055	+		GFF109	0.18	+0.5
95,059	+		GFF109	0.18	-2.1
95,059	+		GFF109	0.18	-1.6
95,179	+		GFF109	0.34	+0.6
95,649	+				+0.7
95,896	+		GFF110	0.20	-1.2
95,962	+		GFF110	0.27	-2.7
96,104	-		GFF110	0.41	+0.1
96,144	-		GFF110	0.46	-2.3
96,144	-		GFF110	0.46	-0.5
96,149	-		GFF110	0.46	+0.5
96,215	+		GFF110	0.53	-1.8
96,384	-		GFF110	0.70	-1.4
96,683	-				-2.5
96,683	-				-0.7