Experiment: Dictyostellum sp.mixed culture-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF685 and GFF686 are separated by 7 nucleotides GFF686 and GFF687 are separated by 2 nucleotides GFF687 and GFF688 overlap by 1 nucleotides
GFF685 - Putative inner membrane protein, at 42,044 to 42,643
GFF685
GFF686 - Putative inner membrane protein, at 42,651 to 43,211
GFF686
GFF687 - Inner membrane protein YbhQ, at 43,214 to 44,176
GFF687
GFF688 - Cardiolipin synthetase (EC 2.7.8.-), at 44,176 to 45,417
GFF688
Position (kb) 43
44
45 Strain fitness (log2 ratio) -1
0
1 at 42.595 kb on - strand at 42.782 kb on + strand, within GFF686 at 42.858 kb on - strand, within GFF686 at 42.881 kb on + strand, within GFF686 at 43.094 kb on + strand, within GFF686 at 43.095 kb on - strand, within GFF686 at 43.153 kb on - strand, within GFF686 at 43.153 kb on - strand, within GFF686 at 43.153 kb on - strand, within GFF686 at 43.363 kb on + strand, within GFF687 at 43.363 kb on + strand, within GFF687 at 43.609 kb on + strand, within GFF687 at 43.610 kb on - strand, within GFF687 at 43.644 kb on + strand, within GFF687 at 43.645 kb on - strand, within GFF687 at 43.645 kb on - strand, within GFF687 at 43.654 kb on + strand, within GFF687 at 43.738 kb on + strand, within GFF687 at 43.763 kb on - strand, within GFF687 at 43.783 kb on + strand, within GFF687 at 43.810 kb on + strand, within GFF687 at 43.813 kb on + strand, within GFF687 at 43.814 kb on - strand, within GFF687 at 43.839 kb on + strand, within GFF687 at 43.900 kb on - strand, within GFF687 at 43.996 kb on + strand, within GFF687 at 44.022 kb on - strand, within GFF687 at 44.171 kb on - strand at 44.171 kb on - strand at 44.269 kb on - strand at 44.367 kb on + strand, within GFF688 at 44.367 kb on + strand, within GFF688 at 44.367 kb on + strand, within GFF688 at 44.367 kb on + strand, within GFF688 at 44.368 kb on - strand, within GFF688 at 44.368 kb on - strand, within GFF688 at 44.368 kb on - strand, within GFF688 at 44.368 kb on - strand, within GFF688 at 44.410 kb on + strand, within GFF688 at 44.574 kb on - strand, within GFF688 at 44.604 kb on + strand, within GFF688 at 44.605 kb on - strand, within GFF688 at 44.979 kb on - strand, within GFF688 at 45.013 kb on - strand, within GFF688 at 45.013 kb on - strand, within GFF688 at 45.031 kb on - strand, within GFF688 at 45.031 kb on - strand, within GFF688 at 45.051 kb on + strand, within GFF688 at 45.097 kb on - strand, within GFF688
Per-strain Table
Position Strand Gene LocusTag Fraction Dictyostellum sp.mixed culture-1 remove 42,595 - -0.2 42,782 + GFF686 0.23 +0.4 42,858 - GFF686 0.37 -0.1 42,881 + GFF686 0.41 -0.1 43,094 + GFF686 0.79 -0.4 43,095 - GFF686 0.79 +0.3 43,153 - GFF686 0.89 -0.0 43,153 - GFF686 0.89 +1.3 43,153 - GFF686 0.89 +0.0 43,363 + GFF687 0.15 -0.0 43,363 + GFF687 0.15 -0.5 43,609 + GFF687 0.41 -0.5 43,610 - GFF687 0.41 +0.1 43,644 + GFF687 0.45 +0.0 43,645 - GFF687 0.45 +0.1 43,645 - GFF687 0.45 -0.3 43,654 + GFF687 0.46 -0.6 43,738 + GFF687 0.54 +0.4 43,763 - GFF687 0.57 -0.1 43,783 + GFF687 0.59 -0.2 43,810 + GFF687 0.62 +0.1 43,813 + GFF687 0.62 -1.1 43,814 - GFF687 0.62 -0.2 43,839 + GFF687 0.65 -1.7 43,900 - GFF687 0.71 -0.2 43,996 + GFF687 0.81 -0.4 44,022 - GFF687 0.84 -1.3 44,171 - -0.4 44,171 - -0.0 44,269 - +0.1 44,367 + GFF688 0.15 +0.6 44,367 + GFF688 0.15 -0.3 44,367 + GFF688 0.15 +0.2 44,367 + GFF688 0.15 +0.1 44,368 - GFF688 0.15 -0.2 44,368 - GFF688 0.15 +0.2 44,368 - GFF688 0.15 -0.1 44,368 - GFF688 0.15 +0.3 44,410 + GFF688 0.19 +0.2 44,574 - GFF688 0.32 +0.1 44,604 + GFF688 0.34 +0.5 44,605 - GFF688 0.35 +1.4 44,979 - GFF688 0.65 -0.2 45,013 - GFF688 0.67 +0.2 45,013 - GFF688 0.67 -0.1 45,031 - GFF688 0.69 +0.1 45,031 - GFF688 0.69 +0.9 45,051 + GFF688 0.70 -0.4 45,097 - GFF688 0.74 +0.3
Or see this region's nucleotide sequence